Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gm24841-201ENSMUST00000158676 357 ntBASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gm7889-201ENSMUST00000185591 958 ntBASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gm37102-201ENSMUST00000195740 1105 ntBASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb3Q91XZ7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb3Q91XZ7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb3Q91XZ7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms