Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb4Q91XX6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Gm44044-201ENSMUST00000205178 1089 ntBASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb4Q91XX6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Gm13836-201ENSMUST00000121159 501 ntBASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb4Q91XX6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhgb4Q91XX6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhgb4Q91XX6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Pcdhgb4Q91XX6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb4Q91XX6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb4Q91XX6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb4Q91XX6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms