Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Gm6649-201ENSMUST00000199743 1165 ntBASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 AC154757.2-201ENSMUST00000228885 743 ntBASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb17Q91VD8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Gm34391-201ENSMUST00000203706 907 ntBASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb17Q91VD8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb17Q91VD8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Gm7153-201ENSMUST00000117092 455 ntBASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Birc2-201ENSMUST00000054878 378 ntBASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb17Q91VD8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms