Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.68■□□□□ 0.1
Vsx1Q91V10 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.68■□□□□ 0.1
Vsx1Q91V10 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.68■□□□□ 0.1
Vsx1Q91V10 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.68■□□□□ 0.1
Vsx1Q91V10 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.67■□□□□ 0.1
Vsx1Q91V10 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.67■□□□□ 0.1
Vsx1Q91V10 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Gm13616-201ENSMUST00000120600 222 ntBASIC15.67■□□□□ 0.1
Vsx1Q91V10 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Gm27646-201ENSMUST00000183989 110 ntBASIC15.67■□□□□ 0.1
Vsx1Q91V10 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Dancr-204ENSMUST00000132389 2347 ntBASIC15.67■□□□□ 0.1
Vsx1Q91V10 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx1Q91V10 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Gm25406-201ENSMUST00000157599 105 ntBASIC15.66■□□□□ 0.1
Vsx1Q91V10 Gm17271-201ENSMUST00000165535 355 ntBASIC15.66■□□□□ 0.1
Vsx1Q91V10 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.66■□□□□ 0.1
Vsx1Q91V10 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx1Q91V10 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.65■□□□□ 0.1
Vsx1Q91V10 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 AA543401-201ENSMUST00000164248 1269 ntBASIC15.65■□□□□ 0.1
Vsx1Q91V10 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx1Q91V10 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Vsx1Q91V10 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Vsx1Q91V10 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms