Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.47■□□□□ 0.23
Trim60Q8VI40 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Gm44430-201ENSMUST00000203376 995 ntBASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim60Q8VI40 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Mir6982-201ENSMUST00000184354 68 ntBASIC16.46■□□□□ 0.23
Trim60Q8VI40 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim60Q8VI40 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim60Q8VI40 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim60Q8VI40 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Trim60Q8VI40 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.46■□□□□ 0.22
Trim60Q8VI40 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.45■□□□□ 0.22
Trim60Q8VI40 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Gm11355-201ENSMUST00000121120 306 ntBASIC16.45■□□□□ 0.22
Trim60Q8VI40 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Gm21559-201ENSMUST00000220638 855 ntBASIC16.45■□□□□ 0.22
Trim60Q8VI40 Gm8587-201ENSMUST00000076538 843 ntBASIC16.45■□□□□ 0.22
Trim60Q8VI40 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim60Q8VI40 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 App-207ENSMUST00000227737 2827 ntBASIC16.44■□□□□ 0.22
Trim60Q8VI40 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim60Q8VI40 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim60Q8VI40 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim60Q8VI40 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms