Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Phf7-203ENSMUST00000226565 1971 ntBASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpa1Q8VEE4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Gm27011-201ENSMUST00000182352 972 ntBASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpa1Q8VEE4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Gm15378-201ENSMUST00000121894 207 ntBASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rpa1Q8VEE4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Gm36967-201ENSMUST00000193814 266 ntBASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpa1Q8VEE4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpa1Q8VEE4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms