Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rprd1aQ8VDS4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rprd1aQ8VDS4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rprd1aQ8VDS4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms