Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm8825-201ENSMUST00000182565 998 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm4518-201ENSMUST00000182638 718 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpap2Q8VC34 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Gm9103-201ENSMUST00000119371 405 ntBASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpap2Q8VC34 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpap2Q8VC34 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpap2Q8VC34 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms