Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Top1mtQ8R4U6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Top1mtQ8R4U6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Top1mtQ8R4U6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 App-207ENSMUST00000227737 2827 ntBASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Top1mtQ8R4U6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Gm44454-201ENSMUST00000198541 138 ntBASIC19■□□□□ 0.63
Top1mtQ8R4U6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Top1mtQ8R4U6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gm14859-201ENSMUST00000117752 357 ntBASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gm25406-201ENSMUST00000157599 105 ntBASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gm6257-201ENSMUST00000163864 910 ntBASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Top1mtQ8R4U6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Gm27357-201ENSMUST00000183754 135 ntBASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Top1mtQ8R4U6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Top1mtQ8R4U6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Top1mtQ8R4U6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms