Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Gm4459-201ENSMUST00000118750 468 ntBASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chrna3Q8R4G9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44357-201ENSMUST00000195897 142 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm19658-201ENSMUST00000196231 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44367-201ENSMUST00000196836 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44350-201ENSMUST00000197197 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44390-201ENSMUST00000197533 144 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44313-201ENSMUST00000198018 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44486-201ENSMUST00000198508 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44314-201ENSMUST00000199263 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44394-201ENSMUST00000199558 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44484-201ENSMUST00000199873 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44466-201ENSMUST00000200264 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44359-201ENSMUST00000200671 138 ntBASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chrna3Q8R4G9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Gm8655-201ENSMUST00000221159 852 ntBASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chrna3Q8R4G9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chrna3Q8R4G9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms