Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim29Q8R2Q0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim29Q8R2Q0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim29Q8R2Q0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Mir6404-201ENSMUST00000183699 94 ntBASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim29Q8R2Q0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trim29Q8R2Q0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Trim29Q8R2Q0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim29Q8R2Q0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Gm13312-201ENSMUST00000119631 718 ntBASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Gm27742-201ENSMUST00000184667 60 ntBASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms