Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp40Q8R1F9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17■□□□□ 0.31
Rpp40Q8R1F9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17■□□□□ 0.31
Rpp40Q8R1F9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17■□□□□ 0.31
Rpp40Q8R1F9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17■□□□□ 0.31
Rpp40Q8R1F9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 Gm38327-201ENSMUST00000195852 1755 ntBASIC17■□□□□ 0.31
Rpp40Q8R1F9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp40Q8R1F9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp40Q8R1F9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp40Q8R1F9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp40Q8R1F9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms