Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Gm44454-201ENSMUST00000198541 138 ntBASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf7Q8R0S1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atf7Q8R0S1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Gm27357-201ENSMUST00000183754 135 ntBASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf7Q8R0S1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf7Q8R0S1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms