Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cchcr1Q8K2I2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Gm10231-201ENSMUST00000181584 441 ntBASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Gm10175-202ENSMUST00000208752 441 ntBASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 App-207ENSMUST00000227737 2827 ntBASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cchcr1Q8K2I2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cchcr1Q8K2I2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cchcr1Q8K2I2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cchcr1Q8K2I2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cchcr1Q8K2I2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms