Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Gm2274-201ENSMUST00000184539 609 ntBASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Calcoco1Q8CGU1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.62■□□□□ 0.25
Calcoco1Q8CGU1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Gm17661-201ENSMUST00000170317 270 ntBASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Gm7977-201ENSMUST00000193787 748 ntBASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Calcoco1Q8CGU1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Gm45058-201ENSMUST00000205810 766 ntBASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Il3ra-202ENSMUST00000223589 738 ntBASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Calcoco1Q8CGU1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Mir5130-201ENSMUST00000175160 84 ntBASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Calcoco1Q8CGU1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms