Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Gm44771-201ENSMUST00000206975 626 ntBASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Gm44450-201ENSMUST00000199528 114 ntBASIC18.74■□□□□ 0.59
Nup88Q8CEC0 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup88Q8CEC0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup88Q8CEC0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Gm15372-201ENSMUST00000120729 834 ntBASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup88Q8CEC0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.71■□□□□ 0.59
Nup88Q8CEC0 Gm29707-201ENSMUST00000196325 491 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms