Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Mir6404-201ENSMUST00000183699 94 ntBASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc38Q8CDN8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc38Q8CDN8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc38Q8CDN8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 App-207ENSMUST00000227737 2827 ntBASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc38Q8CDN8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc38Q8CDN8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc38Q8CDN8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc38Q8CDN8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc38Q8CDN8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc38Q8CDN8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc38Q8CDN8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms