Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vcpip1Q8CDG3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vcpip1Q8CDG3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vcpip1Q8CDG3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vcpip1Q8CDG3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms