Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Gm18622-201ENSMUST00000219361 595 ntBASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Haglr-201ENSMUST00000100000 2085 ntBASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf31Q8CCF0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Gm7230-201ENSMUST00000173026 815 ntBASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Gm6089-201ENSMUST00000197666 938 ntBASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf31Q8CCF0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf31Q8CCF0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.33■□□□□ 0.37
Prpf31Q8CCF0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf31Q8CCF0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf31Q8CCF0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Prpf31Q8CCF0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
Prpf31Q8CCF0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Gm15173-201ENSMUST00000122049 433 ntBASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms