Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Prob1-201ENSMUST00000097619 3021 ntBASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa4Q8CA71 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shisa4Q8CA71 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shisa4Q8CA71 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shisa4Q8CA71 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Shisa4Q8CA71 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Shisa4Q8CA71 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Gm1401-201ENSMUST00000122048 772 ntBASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa4Q8CA71 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa4Q8CA71 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gm7230-201ENSMUST00000173026 815 ntBASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gm10060-201ENSMUST00000212002 111 ntBASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa4Q8CA71 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms