Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alx1Q8C8B0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Alx1Q8C8B0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Alx1Q8C8B0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Alx1Q8C8B0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Alx1Q8C8B0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.52■□□□□ 0.55
Alx1Q8C8B0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.52■□□□□ 0.55
Alx1Q8C8B0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Alx1Q8C8B0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Alx1Q8C8B0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.49■□□□□ 0.55
Alx1Q8C8B0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Mzt1-203ENSMUST00000227948 952 ntBASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Alx1Q8C8B0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.48■□□□□ 0.55
Alx1Q8C8B0 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Alx1Q8C8B0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms