Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Mir6990-201ENSMUST00000183724 91 ntBASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm45612-201ENSMUST00000211320 160 ntBASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Mir1895-201ENSMUST00000122615 79 ntBASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Gm18622-201ENSMUST00000219361 595 ntBASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a6Q8C6K9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Mir449b-201ENSMUST00000104833 80 ntBASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Gm17271-201ENSMUST00000165535 355 ntBASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a6Q8C6K9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a6Q8C6K9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Gm11745-201ENSMUST00000121669 448 ntBASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms