Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps9d1Q8C190 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps9d1Q8C190 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps9d1Q8C190 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps9d1Q8C190 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps9d1Q8C190 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Mir5130-201ENSMUST00000175160 84 ntBASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Gm18421-201ENSMUST00000204122 625 ntBASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps9d1Q8C190 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Gm7370-201ENSMUST00000219471 767 ntBASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps9d1Q8C190 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Gm36967-201ENSMUST00000193814 266 ntBASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Gm45058-201ENSMUST00000205810 766 ntBASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms