Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Sh3rf3Q8C120 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf3Q8C120 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 App-207ENSMUST00000227737 2827 ntBASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Sh3rf3Q8C120 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Prob1-201ENSMUST00000097619 3021 ntBASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3rf3Q8C120 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms