Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Gm7222-201ENSMUST00000117512 906 ntBASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Gm6550-201ENSMUST00000187574 993 ntBASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdk5rap1Q8BTW8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cdk5rap1Q8BTW8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdk5rap1Q8BTW8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdk5rap1Q8BTW8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Cdk5rap1Q8BTW8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdk5rap1Q8BTW8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdk5rap1Q8BTW8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Gm6257-201ENSMUST00000163864 910 ntBASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 AV026068-213ENSMUST00000223675 1171 ntBASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdk5rap1Q8BTW8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms