Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpne3Q8BT60 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpne3Q8BT60 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpne3Q8BT60 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.37■□□□□ 0.05
Cpne3Q8BT60 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Gm11355-201ENSMUST00000121120 306 ntBASIC15.36■□□□□ 0.05
Cpne3Q8BT60 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpne3Q8BT60 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms