Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam78bQ8BQN5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fam78bQ8BQN5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Gm8520-201ENSMUST00000186517 868 ntBASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fam78bQ8BQN5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 App-207ENSMUST00000227737 2827 ntBASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fam78bQ8BQN5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Actl10-202ENSMUST00000226583 1501 ntBASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fam78bQ8BQN5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms