Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh20Q8BIZ0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh20Q8BIZ0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh20Q8BIZ0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh20Q8BIZ0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh20Q8BIZ0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdh20Q8BIZ0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Gm11336-201ENSMUST00000118168 334 ntBASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Gm7284-201ENSMUST00000131667 944 ntBASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Gm6623-201ENSMUST00000173570 544 ntBASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdh20Q8BIZ0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Mir770-201ENSMUST00000103252 94 ntBASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh20Q8BIZ0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms