Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc40Q8BI79 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc40Q8BI79 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc40Q8BI79 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Mir7071-201ENSMUST00000184847 69 ntBASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc40Q8BI79 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccdc40Q8BI79 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms