Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Depdc1bQ8BH88 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Gm7461-201ENSMUST00000058918 827 ntBASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Depdc1bQ8BH88 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Depdc1bQ8BH88 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Gm24589-201ENSMUST00000116692 94 ntBASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Gm10052-201ENSMUST00000168019 960 ntBASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Gm7729-201ENSMUST00000050143 801 ntBASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Depdc1bQ8BH88 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.25■□□□□ 0.35
Depdc1bQ8BH88 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms