Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc116Q80X53 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc116Q80X53 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 AA414768-201ENSMUST00000121924 1257 ntBASIC15.55■□□□□ 0.08
Ccdc116Q80X53 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.55■□□□□ 0.08
Ccdc116Q80X53 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc116Q80X53 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Gm13836-201ENSMUST00000121159 501 ntBASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Gm25016-201ENSMUST00000158399 131 ntBASIC15.54■□□□□ 0.08
Ccdc116Q80X53 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Gm45328-201ENSMUST00000210942 917 ntBASIC15.54■□□□□ 0.08
Ccdc116Q80X53 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms