Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim36Q80WG7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim36Q80WG7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim36Q80WG7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim36Q80WG7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim36Q80WG7 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.38■□□□□ 0.05
Trim36Q80WG7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim36Q80WG7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Gm14859-201ENSMUST00000117752 357 ntBASIC15.37■□□□□ 0.05
Trim36Q80WG7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.37■□□□□ 0.05
Trim36Q80WG7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Ank2-226ENSMUST00000189368 339 ntBASIC15.37■□□□□ 0.05
Trim36Q80WG7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim36Q80WG7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim36Q80WG7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Actl10-202ENSMUST00000226583 1501 ntBASIC15.36■□□□□ 0.05
Trim36Q80WG7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim36Q80WG7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Gm9013-201ENSMUST00000132939 882 ntBASIC15.35■□□□□ 0.05
Trim36Q80WG7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Gm29518-201ENSMUST00000190858 372 ntBASIC15.35■□□□□ 0.05
Trim36Q80WG7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trim36Q80WG7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms