Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.3■□□□□ 0.52
Prpf40bQ80W14 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf40bQ80W14 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf40bQ80W14 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf40bQ80W14 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf40bQ80W14 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms