Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.43■□□□□ 0.22
Trim62Q80V85 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Mir8098-201ENSMUST00000184011 137 ntBASIC16.42■□□□□ 0.22
Trim62Q80V85 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim62Q80V85 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim62Q80V85 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim62Q80V85 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim62Q80V85 Gm8097-201ENSMUST00000117903 829 ntBASIC16.41■□□□□ 0.22
Trim62Q80V85 Gm8344-201ENSMUST00000119813 856 ntBASIC16.41■□□□□ 0.22
Trim62Q80V85 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Trim62Q80V85 Gm28659-201ENSMUST00000188013 759 ntBASIC16.41■□□□□ 0.22
Trim62Q80V85 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim62Q80V85 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim62Q80V85 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim62Q80V85 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim62Q80V85 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Gm4535-201ENSMUST00000182274 558 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 Gm27741-201ENSMUST00000185060 237 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Gm10355-201ENSMUST00000097146 517 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.4■□□□□ 0.22
Trim62Q80V85 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms