Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Gm27867-201ENSMUST00000184778 125 ntBASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 AV026068-213ENSMUST00000223675 1171 ntBASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38bQ80SY5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38bQ80SY5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38bQ80SY5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38bQ80SY5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38bQ80SY5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38bQ80SY5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Prpf38bQ80SY5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38bQ80SY5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38bQ80SY5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Gm25911-201ENSMUST00000157621 56 ntBASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms