Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
Pif1Q80SX8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Gm9727-201ENSMUST00000161387 555 ntBASIC14.64□□□□□ -0.07
Pif1Q80SX8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Gm2756-201ENSMUST00000195851 400 ntBASIC14.64□□□□□ -0.07
Pif1Q80SX8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.64□□□□□ -0.07
Pif1Q80SX8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pif1Q80SX8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.63□□□□□ -0.07
Pif1Q80SX8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pif1Q80SX8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Gm13216-201ENSMUST00000117145 591 ntBASIC14.62□□□□□ -0.07
Pif1Q80SX8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.62□□□□□ -0.07
Pif1Q80SX8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pif1Q80SX8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.62□□□□□ -0.07
Pif1Q80SX8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.61□□□□□ -0.07
Pif1Q80SX8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms