Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Gm13418-201ENSMUST00000119097 944 ntBASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh8Q7TSK3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdh8Q7TSK3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh8Q7TSK3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Gm15173-201ENSMUST00000122049 433 ntBASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh8Q7TSK3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms