Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Gm10253-201ENSMUST00000194270 940 ntBASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Gm10154-201ENSMUST00000084445 354 ntBASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ShprhQ7TPQ3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ShprhQ7TPQ3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ShprhQ7TPQ3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ShprhQ7TPQ3 AC131710.1-201ENSMUST00000228336 990 ntBASIC22.33■■□□□ 1.16
ShprhQ7TPQ3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ShprhQ7TPQ3 Gm13410-201ENSMUST00000117058 1415 ntBASIC22.33■■□□□ 1.16
ShprhQ7TPQ3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShprhQ7TPQ3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Gm6018-201ENSMUST00000216090 1306 ntBASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Gm7774-201ENSMUST00000200064 533 ntBASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Gm44729-201ENSMUST00000206759 2052 ntBASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Gm13337-201ENSMUST00000119183 1594 ntBASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.31■■□□□ 1.16
ShprhQ7TPQ3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Gm22175-201ENSMUST00000175007 78 ntBASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShprhQ7TPQ3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShprhQ7TPQ3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms