Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nphp3Q7TNH6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp3Q7TNH6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp3Q7TNH6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp3Q7TNH6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp3Q7TNH6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nphp3Q7TNH6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Gm7230-201ENSMUST00000173026 815 ntBASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Gm18622-201ENSMUST00000219361 595 ntBASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nphp3Q7TNH6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nphp3Q7TNH6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Nphp3Q7TNH6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nphp3Q7TNH6 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm8825-201ENSMUST00000182565 998 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm4518-201ENSMUST00000182638 718 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm6089-201ENSMUST00000197666 938 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Mir5131-201ENSMUST00000175426 93 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Gm2651-201ENSMUST00000203560 838 ntBASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nphp3Q7TNH6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp3Q7TNH6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp3Q7TNH6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nphp3Q7TNH6 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.24■□□□□ 0.67
Nphp3Q7TNH6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms