Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.46■□□□□ 0.23
Cspg5Q71M36 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.46■□□□□ 0.23
Cspg5Q71M36 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg5Q71M36 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cspg5Q71M36 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cspg5Q71M36 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.46■□□□□ 0.22
Cspg5Q71M36 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.45■□□□□ 0.22
Cspg5Q71M36 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg5Q71M36 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cspg5Q71M36 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.43■□□□□ 0.22
Cspg5Q71M36 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.43■□□□□ 0.22
Cspg5Q71M36 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms