Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 AC124549.3-201ENSMUST00000225541 367 ntBASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Syne1Q6ZWR6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm45774-201ENSMUST00000211992 2665 ntBASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm10616-201ENSMUST00000205285 2127 ntBASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm7222-201ENSMUST00000117512 906 ntBASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm24513-201ENSMUST00000174964 138 ntBASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Syne1Q6ZWR6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 AC139382.1-201ENSMUST00000221402 498 ntBASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Syne1Q6ZWR6 Gm11873-201ENSMUST00000117877 1304 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms