Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm4609-201ENSMUST00000106443 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm5138-201ENSMUST00000113842 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm15191-201ENSMUST00000117933 1000 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm12182-201ENSMUST00000118655 1008 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm14494-201ENSMUST00000118786 435 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm13882-201ENSMUST00000120886 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm10284-201ENSMUST00000145057 1005 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm10481-201ENSMUST00000179228 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm2574-201ENSMUST00000181051 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm3200-201ENSMUST00000181493 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm8825-201ENSMUST00000182565 998 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm4518-201ENSMUST00000182638 718 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm8330-201ENSMUST00000182754 1008 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm4575-201ENSMUST00000182991 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm8709-201ENSMUST00000183230 1012 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm27628-201ENSMUST00000184911 107 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm10293-201ENSMUST00000076317 1002 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Gm6316-201ENSMUST00000082064 1020 ntBASIC19■□□□□ 0.63
Npc1l1Q6T3U4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm7222-201ENSMUST00000117512 906 ntBASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Npc1l1Q6T3U4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms