Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gm12151-201ENSMUST00000121374 290 ntBASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gm5745-201ENSMUST00000183748 313 ntBASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gm10499-201ENSMUST00000174094 934 ntBASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn10aQ6QIY3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Scn10aQ6QIY3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Gm2423-201ENSMUST00000074863 733 ntBASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Gm27306-201ENSMUST00000183970 107 ntBASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Gm27430-201ENSMUST00000184585 107 ntBASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Gm44333-201ENSMUST00000197168 107 ntBASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn10aQ6QIY3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scn10aQ6QIY3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scn10aQ6QIY3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.83■□□□□ 0.45
Scn10aQ6QIY3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn10aQ6QIY3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms