Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx58Q6Q899 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Gm37153-201ENSMUST00000193637 231 ntBASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.61■□□□□ 0.73
Ddx58Q6Q899 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx58Q6Q899 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Gm15467-201ENSMUST00000120582 445 ntBASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.6■□□□□ 0.73
Ddx58Q6Q899 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx58Q6Q899 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx58Q6Q899 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx58Q6Q899 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.58■□□□□ 0.73
Ddx58Q6Q899 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx58Q6Q899 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ddx58Q6Q899 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.58■□□□□ 0.73
Ddx58Q6Q899 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx58Q6Q899 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Gm9727-201ENSMUST00000161387 555 ntBASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Gm5264-201ENSMUST00000190584 848 ntBASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ddx58Q6Q899 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Gm12260-201ENSMUST00000122447 411 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms