Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.37□□□□□ -0.27
Rif1Q6PR54 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.37□□□□□ -0.27
Rif1Q6PR54 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.37□□□□□ -0.27
Rif1Q6PR54 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Gm15198-201ENSMUST00000117283 177 ntBASIC13.37□□□□□ -0.27
Rif1Q6PR54 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rif1Q6PR54 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Gm15236-201ENSMUST00000117309 379 ntBASIC13.36□□□□□ -0.27
Rif1Q6PR54 Gm9385-201ENSMUST00000117563 472 ntBASIC13.36□□□□□ -0.27
Rif1Q6PR54 Gm27680-201ENSMUST00000184192 160 ntBASIC13.36□□□□□ -0.27
Rif1Q6PR54 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.36□□□□□ -0.27
Rif1Q6PR54 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rif1Q6PR54 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rif1Q6PR54 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.35□□□□□ -0.27
Rif1Q6PR54 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm12859-201ENSMUST00000117834 427 ntBASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm45841-201ENSMUST00000207700 164 ntBASIC13.35□□□□□ -0.27
Rif1Q6PR54 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.35□□□□□ -0.27
Rif1Q6PR54 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Syt7-204ENSMUST00000223586 1344 ntBASIC13.35□□□□□ -0.27
Rif1Q6PR54 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rif1Q6PR54 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Gm12138-201ENSMUST00000122180 951 ntBASIC13.34□□□□□ -0.27
Rif1Q6PR54 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms