Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup98Q6PFD9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup98Q6PFD9 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.58■□□□□ 0.57
Nup98Q6PFD9 Gm5312-201ENSMUST00000203728 547 ntBASIC18.58■□□□□ 0.57
Nup98Q6PFD9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nup98Q6PFD9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.58■□□□□ 0.57
Nup98Q6PFD9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup98Q6PFD9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup98Q6PFD9 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.58■□□□□ 0.57
Nup98Q6PFD9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nup98Q6PFD9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Gm14701-201ENSMUST00000117156 348 ntBASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Gm16198-201ENSMUST00000118766 670 ntBASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup98Q6PFD9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Gm9385-201ENSMUST00000117563 472 ntBASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Rpph1-201ENSMUST00000175096 319 ntBASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Nup98Q6PFD9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Gm10499-201ENSMUST00000174094 934 ntBASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup98Q6PFD9 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.54■□□□□ 0.56
Nup98Q6PFD9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup98Q6PFD9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Gm26308-201ENSMUST00000157768 69 ntBASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Mir6990-201ENSMUST00000183724 91 ntBASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms