Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Gm17271-201ENSMUST00000165535 355 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.58■□□□□ 0.88
Chd4Q6PDQ2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd4Q6PDQ2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Gm13365-201ENSMUST00000121188 973 ntBASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Rprl2-201ENSMUST00000157150 290 ntBASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Gm7063-201ENSMUST00000186840 981 ntBASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd4Q6PDQ2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd4Q6PDQ2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd4Q6PDQ2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms