Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ShbQ6PD21 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShbQ6PD21 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShbQ6PD21 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShbQ6PD21 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShbQ6PD21 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.09■□□□□ 0.33
ShbQ6PD21 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShbQ6PD21 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShbQ6PD21 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShbQ6PD21 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShbQ6PD21 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ShbQ6PD21 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.08■□□□□ 0.32
ShbQ6PD21 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.08■□□□□ 0.32
ShbQ6PD21 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.08■□□□□ 0.32
ShbQ6PD21 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.08■□□□□ 0.32
ShbQ6PD21 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShbQ6PD21 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.07■□□□□ 0.32
ShbQ6PD21 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ShbQ6PD21 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.07■□□□□ 0.32
ShbQ6PD21 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.07■□□□□ 0.32
ShbQ6PD21 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.07■□□□□ 0.32
ShbQ6PD21 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShbQ6PD21 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.07■□□□□ 0.32
ShbQ6PD21 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
ShbQ6PD21 Gm2810-201ENSMUST00000118681 990 ntBASIC17.06■□□□□ 0.32
ShbQ6PD21 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.06■□□□□ 0.32
ShbQ6PD21 Gm18187-201ENSMUST00000196476 984 ntBASIC17.06■□□□□ 0.32
ShbQ6PD21 Gm9794-201ENSMUST00000202370 423 ntBASIC17.06■□□□□ 0.32
ShbQ6PD21 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.06■□□□□ 0.32
ShbQ6PD21 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.06■□□□□ 0.32
ShbQ6PD21 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.06■□□□□ 0.32
ShbQ6PD21 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.06■□□□□ 0.32
ShbQ6PD21 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ShbQ6PD21 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShbQ6PD21 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
ShbQ6PD21 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
ShbQ6PD21 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.05■□□□□ 0.32
ShbQ6PD21 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.05■□□□□ 0.32
ShbQ6PD21 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ShbQ6PD21 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Gm12490-201ENSMUST00000120255 560 ntBASIC17.05■□□□□ 0.32
ShbQ6PD21 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ShbQ6PD21 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShbQ6PD21 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ShbQ6PD21 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
ShbQ6PD21 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.04■□□□□ 0.32
ShbQ6PD21 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ShbQ6PD21 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ShbQ6PD21 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.04■□□□□ 0.32
ShbQ6PD21 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShbQ6PD21 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms