Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm11452-201ENSMUST00000122376 690 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm8825-201ENSMUST00000182565 998 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm4518-201ENSMUST00000182638 718 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm6296-201ENSMUST00000222599 943 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.66■□□□□ 0.26
Scube3Q66PY1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scube3Q66PY1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.65■□□□□ 0.26
Scube3Q66PY1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Gm12497-201ENSMUST00000138778 237 ntBASIC16.65■□□□□ 0.26
Scube3Q66PY1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scube3Q66PY1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scube3Q66PY1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Scube3Q66PY1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44357-201ENSMUST00000195897 142 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm19658-201ENSMUST00000196231 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44367-201ENSMUST00000196836 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44350-201ENSMUST00000197197 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44390-201ENSMUST00000197533 144 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44313-201ENSMUST00000198018 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44486-201ENSMUST00000198508 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44314-201ENSMUST00000199263 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44394-201ENSMUST00000199558 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44484-201ENSMUST00000199873 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44466-201ENSMUST00000200264 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm44359-201ENSMUST00000200671 138 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Gm8655-201ENSMUST00000221159 852 ntBASIC16.64■□□□□ 0.25
Scube3Q66PY1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scube3Q66PY1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.63■□□□□ 0.25
Scube3Q66PY1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms