Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.06■□□□□ 0.8
Clcn1Q64347 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.06■□□□□ 0.8
Clcn1Q64347 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.06■□□□□ 0.8
Clcn1Q64347 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn1Q64347 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
Clcn1Q64347 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Clcn1Q64347 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.05■□□□□ 0.8
Clcn1Q64347 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.05■□□□□ 0.8
Clcn1Q64347 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Chchd1-203ENSMUST00000224633 557 ntBASIC20.05■□□□□ 0.8
Clcn1Q64347 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clcn1Q64347 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.05■□□□□ 0.8
Clcn1Q64347 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn1Q64347 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.04■□□□□ 0.8
Clcn1Q64347 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.04■□□□□ 0.8
Clcn1Q64347 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clcn1Q64347 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn1Q64347 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.03■□□□□ 0.8
Clcn1Q64347 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.03■□□□□ 0.8
Clcn1Q64347 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn1Q64347 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Clcn1Q64347 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Auts2-212ENSMUST00000178555 309 ntBASIC20.02■□□□□ 0.8
Clcn1Q64347 Mir8117-201ENSMUST00000184773 107 ntBASIC20.02■□□□□ 0.8
Clcn1Q64347 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Gm37444-201ENSMUST00000193605 439 ntBASIC20.02■□□□□ 0.8
Clcn1Q64347 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.02■□□□□ 0.8
Clcn1Q64347 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clcn1Q64347 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn1Q64347 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms